San Diego’s Trius Therapeutics Creates Options for the Next Generation of Antibiotics

a total of $50 million in the offering—prompting the company to re-evaluate its capital-spending plan. “It kind of forced us into the strategy of initiating just one Phase 3 trial,” Stein said.

So, instead of running two late-stage trials of torezolid at the same time, as planned, the company now plans to first assess an oral version of the antibiotic, and then later determine how well patients who begin an intravenous form of the antibiotic can handle the shift to an oral version.

Earlier this year, Trius showed that torezolid also could be highly effective in treating lung infections caused by Staphylococcus and Streptococcus bacteria—opening another potentially lucrative market.

The company might yet seek a strategic partnership with a major pharmaceutical. But Stein said Trius has retained most of its original strategy, which called for funding its late-stage trials of leading drug candidates from the financing tools available to public companies.

To build up the company’s pipeline of future antibiotics, Trius has relied on federal research grants to help identify and develop early stage compounds. In April, for example, Trius said it was getting $3 million over the next three years to work with the Lawrence Livermore National Laboratory to help develop new antibiotics directed against multi-drug resistant (MDR) bacterial pathogens. The project is the company’s second collaboration with the federal lab in Livermore, CA, and is intended to combine Lawrence Livermore’s computational capabilities (and expertise in defending against biological weapons) with Trius’ expertise in structure-based drug design and its antisense screening technology to identify potential new antibiotic compounds.

Much of Trius’ R&D work is focused on so-called gram-negative bacteria, which include microbes responsible for bubonic plague and tularemia as well as common hospital infections. Gram-negative bacteria can be resistant to a variety of standard antibiotics (Stein explained that the microbes are protected by a type of double-cellular wall), and Trius has been searching for ways to kill the bacteria by disrupting cell wall biosynthesis.

Trius first realized the potential for such R&D funding in 2008, when the company entered into a $27.7 million, five-year contract with the National Institute of Allergies and Infectious Disease to help identify and optimize new antibiotics. In 2010, the Pentagon’s Defense Threat Reduction Agency awarded Trius a second $29.5 million contract to use its screening technology to identify more potential antibacterial compounds from natural marine products.

Altogether, the federal grants landed by Trius exceed $60 million, and Stein dryly noted the company has raised more money through its federal grants than from last year’s IPO. But that’s OK, because as Stein put it, “Our job is to create options.”

Author: Bruce V. Bigelow

In Memoriam: Our dear friend Bruce V. Bigelow passed away on June 29, 2018. He was the editor of Xconomy San Diego from 2008 to 2018. Read more about his life and work here. Bruce Bigelow joined Xconomy from the business desk of the San Diego Union-Tribune. He was a member of the team of reporters who were awarded the 2006 Pulitzer Prize in National Reporting for uncovering bribes paid to San Diego Republican Rep. Randy “Duke” Cunningham in exchange for special legislation earmarks. He also shared a 2006 award for enterprise reporting from the Society of Business Editors and Writers for “In Harm’s Way,” an article about the extraordinary casualty rate among employees working in Iraq for San Diego’s Titan Corp. He has written extensively about the 2002 corporate accounting scandal at software goliath Peregrine Systems. He also was a Gerald Loeb Award finalist and National Headline Award winner for “The Toymaker,” a 14-part chronicle of a San Diego start-up company. He takes special satisfaction, though, that the series was included in the library for nonfiction narrative journalism at the Nieman Foundation for Journalism at Harvard University. Bigelow graduated from U.C. Berkeley in 1977 with a degree in English Literature and from the Columbia University Graduate School of Journalism in 1979. Before joining the Union-Tribune in 1990, he worked for the Associated Press in Los Angeles and The Kansas City Times.