Sapphire Energy & Institute for Systems Biology Partner on Biofuels

Algae-based biofuel, green crude, Sapphire Energy

nonprofit ISB in 2000 to take a multi-disciplinary, systems biology approach to biomedical research. The institute also has served as a showcase for what Hood calls “P4 Medicine,” healthcare that is predictive, preventive, personalized and participatory.

As a world leader in systems biology, the ISB has the ability to combine massive amounts of different kinds of data and to build detailed genetic models of complex processes, such as algal production of crude oil. Such models can then used by Sapphire to predict how algae would respond to changes in nutrients, water quality, temperature, and other environmental conditions.

In a statement released today, ISB’s Hood says, “We hope to reverse engineer the gene networks in algae and create strategies that will significantly improve the yield of green oil and crop protection and reduce significantly the time to market.”

Sapphire’s chief science officer, Alex Aravanis, also is quoted as saying, “By working with ISB to apply their systems biology approach, we’re able to more rapidly identify genes and regulatory pathways that can increase yield and move us toward our goal of making Green Crude a market-viable, crude oil alternative.”

Sapphire’s Zenk explained that while the company is more focused on the immediate commercialization of algae-based biofuels, “we need somebody looking ahead to the next generation.

“We’re not just throwing some stuff at them to do,” Zenk added. “We’re actually integrating some [scientific] teams.”

Author: Bruce V. Bigelow

In Memoriam: Our dear friend Bruce V. Bigelow passed away on June 29, 2018. He was the editor of Xconomy San Diego from 2008 to 2018. Read more about his life and work here. Bruce Bigelow joined Xconomy from the business desk of the San Diego Union-Tribune. He was a member of the team of reporters who were awarded the 2006 Pulitzer Prize in National Reporting for uncovering bribes paid to San Diego Republican Rep. Randy “Duke” Cunningham in exchange for special legislation earmarks. He also shared a 2006 award for enterprise reporting from the Society of Business Editors and Writers for “In Harm’s Way,” an article about the extraordinary casualty rate among employees working in Iraq for San Diego’s Titan Corp. He has written extensively about the 2002 corporate accounting scandal at software goliath Peregrine Systems. He also was a Gerald Loeb Award finalist and National Headline Award winner for “The Toymaker,” a 14-part chronicle of a San Diego start-up company. He takes special satisfaction, though, that the series was included in the library for nonfiction narrative journalism at the Nieman Foundation for Journalism at Harvard University. Bigelow graduated from U.C. Berkeley in 1977 with a degree in English Literature and from the Columbia University Graduate School of Journalism in 1979. Before joining the Union-Tribune in 1990, he worked for the Associated Press in Los Angeles and The Kansas City Times.