BioNano Raises $53M to Identify “Structural Variations” in Genome

BioNano Genomics CEO Erik_Holmlin (BioNano image used with permission)

researchers to identify a host of crucial structural variations in DNA strands that cannot be discerned by next-gen sequencing. Each strand consists of hundreds of thousands of base pairs, and the enzyme labels enable researchers to map variations that include the location of a gene on a chromosome, and the existence of stretches of DNA that are repeated, inverted, or deleted.

In a statement today, Legend Capital’s executive director, Darren Cai, says the ability to understand  structural variations is recognized as an essential tool for applying genomic information in diagnosing and treating human diseases. For example, in most cases of chronic myelogeous leukemia (and some cases of acute lymphocytic and myelogenous leukemia), a piece of chromosome 9 and a piece of chromosome 22 break off and switch places in a translocation known as the Philadelphia chromosome.

[Corrected to show quote attributed to Jim Blair was from Tracy Warren] According to a spokeswoman for the company, Tracy Warren, a general partner of Battelle Ventures and chairwoman of BioNano’s board, describes the Irys System as “the missing link between sequencing data and actionable clinical data.”

Image from Irys System shows parallel DNA strands with fluorescent tags
Image from Irys System shows parallel DNA strands with fluorescent tags

“Customers are adopting our system to address a heretofore unaddressable core of genomic variation called structural variation,” and that makes BioNano’s Irys System complementary to next-gen sequencing machines, Holmlin said. As a result, BioNano is selling its Irys System to many of the same academic research institutions that buy equipment from Illumina.

With the latest round of funding, Holmlin says, “We will use this capital to accelerate global sales of Irys and to invest in next-generation innovation to address the untapped, multi-billion dollar genome-mapping market.”

In addition to the Chinese Academy of Sciences, BioNano has disclosed Irys sales to Australia’s Garvan Institute of Medical Research, Israel’s Tel Aviv University, UC Davis, and The Genome Analysis Centre and Wellcome Trust Sanger Institute near London.

Campbell Murray, managing director at the Novartis Venture Fund, is quoted in the company’s statement as saying, “We saw that BioNano has the only commercial genome mapping system that can systematically analyze clinically important [structural variations], including DNA rearrangements and recombinations, and were inspired to provide capital and expertise to BioNano.”

Murray and Legend Capital’s Cai also are joining BioNano’s board of directors.

Author: Bruce V. Bigelow

In Memoriam: Our dear friend Bruce V. Bigelow passed away on June 29, 2018. He was the editor of Xconomy San Diego from 2008 to 2018. Read more about his life and work here. Bruce Bigelow joined Xconomy from the business desk of the San Diego Union-Tribune. He was a member of the team of reporters who were awarded the 2006 Pulitzer Prize in National Reporting for uncovering bribes paid to San Diego Republican Rep. Randy “Duke” Cunningham in exchange for special legislation earmarks. He also shared a 2006 award for enterprise reporting from the Society of Business Editors and Writers for “In Harm’s Way,” an article about the extraordinary casualty rate among employees working in Iraq for San Diego’s Titan Corp. He has written extensively about the 2002 corporate accounting scandal at software goliath Peregrine Systems. He also was a Gerald Loeb Award finalist and National Headline Award winner for “The Toymaker,” a 14-part chronicle of a San Diego start-up company. He takes special satisfaction, though, that the series was included in the library for nonfiction narrative journalism at the Nieman Foundation for Journalism at Harvard University. Bigelow graduated from U.C. Berkeley in 1977 with a degree in English Literature and from the Columbia University Graduate School of Journalism in 1979. Before joining the Union-Tribune in 1990, he worked for the Associated Press in Los Angeles and The Kansas City Times.